Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2161860	2161875	16	2 [0]	[1] 3	BW25113_RS10880/yegS	hypothetical protein/lipid kinase YegS

AACGACACTCTCTAGTGTTTAAATATAATAATGGCATGATTATTATAAT  >  NZ_CP009273/2161811‑2161859                                                 | aaCGACACTCTCTAGTGTTTAAATATAATAATGGCATGATTATTATAAt  >  1:489080/1‑49 (MQ=255) aaCGACACTCTCTAGTGTTTAAATATAATAATGGCATGATTATTATAAt  <  2:489080/49‑1 (MQ=255)                                                 | AACGACACTCTCTAGTGTTTAAATATAATAATGGCATGATTATTATAAT  >  NZ_CP009273/2161811‑2161859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑