Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2100194	2100218	25	2 [0]	[1] 2	wzy	O16 family O‑antigen polymerase

TAATTGCAAAGATGAATACAATAAAAACAAGTAAAGTAAATGTTT  >  NZ_CP009273/2100149‑2100193                                             | taATTGCAAAGATGAATACAATAAAAACAAGTAAAGTAAATGttt  <  1:600044/45‑1 (MQ=255) taATTGCAAAGATGAATACAATAAAAACAAGTAAAGTAAATGttt  >  2:600044/1‑45 (MQ=255)                                             | TAATTGCAAAGATGAATACAATAAAAACAAGTAAAGTAAATGTTT  >  NZ_CP009273/2100149‑2100193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑