Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3576442	3576466	25	2 [1]	[0] 2	BW25113_RS17825	YrhA family protein

CTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGC  >  NZ_CP009273/3576352‑3576465                                                                                          |                         cTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGatgaa                          <  2:39665/90‑1 (MQ=255)                         aaaaTATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGc  <  1:284211/90‑1 (MQ=255)                                                                                          |                         CTGGCTCAATTTATCCTCCCATGAAAAATATTATGGACCACACAAAATGATGACTAAAACCCAAATAAATAAATTAATAAAAATGATGAATGATTTAGACTATCCATTTGAAGC  >  NZ_CP009273/3576352‑3576465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑