Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3943496	3943500	5	2 [0]	[0] 2	yifB/ilvL	YifB family Mg chelatase‑like AAA ATPase/ilv operon leader peptide

TGGAATGATGCTCGCAAAAATGCAGCGGACAAAGGATGAACTACGAG  >  NZ_CP009273/3943449‑3943495                                               | tGGAATGATGCTCGCAAAAATGCAGCGGACAAAGGATGAACTACGAg  <  1:169010/47‑1 (MQ=255) tGGAATGATGCTCGCAAAAATGCAGCGGACAAAGGATGAACTACGAg  >  2:169010/1‑47 (MQ=255)                                               | TGGAATGATGCTCGCAAAAATGCAGCGGACAAAGGATGAACTACGAG  >  NZ_CP009273/3943449‑3943495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑