Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	235112	235112	1	2 [0]	[0] 2	BW25113_RS01095	hypothetical protein

ACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTG  >  NZ_CP009273/235058‑235111                                                      | acaGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTg  >  1:136630/1‑54 (MQ=255) acaGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTg  <  2:136630/54‑1 (MQ=255)                                                      | ACAGAATCAACATTCTCCAATCATAAAATATTTCCGTGGAGCATTTTATTATTG  >  NZ_CP009273/235058‑235111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑