Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1164412	1164457	46	3 [1]	[0] 2	comR/bhsA	TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA

TATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTAAAGATTTTTAAATT  >  NZ_CP009273/1164324‑1164413                                                                                        |   tattatAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTAAAGATTTTTAaatt  <  1:635787/90‑1 (MQ=255)                                                   atTGCTTTCTATTTAACTGAAATTTAAAGATTTTTaaa    <  1:127153/38‑1 (MQ=255)                                                   atTGCTTTCTATTTAACTGAAATTTAAAGATTTTTaaa    >  2:127153/1‑38 (MQ=255)                                                                                        |   TATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTAAAGATTTTTAAATT  >  NZ_CP009273/1164324‑1164413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑