Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3262622	3262713	92	2 [0]	[1] 3	yhaC	YhaC family protein

TTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCT  >  NZ_CP009273/3262708‑3262797       |                                                                                    ttGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCt  >  2:662725/1‑90 (MQ=255)       aTTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCaaa                                         <  1:498201/45‑1 (MQ=255)       aTTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCaaa                                         >  2:498201/1‑45 (MQ=255)       |                                                                                    TTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCT  >  NZ_CP009273/3262708‑3262797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑