Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1088113	1088154	42	2 [0]	[0] 2	pgaA/dgcT	poly‑beta‑1,6 N‑acetyl‑D‑glucosamine export porin PgaA/GGDEF domain‑containing protein

TGCGCTACGGCACTCACGGATTTAATTGTTATTCCTAATGTATCTAT  >  NZ_CP009273/1088066‑1088112                                               | tGCGCTACGGCACTCACGGATTTAATTGTTATTCCTAATGTATCTAt  <  1:64904/47‑1 (MQ=255) tGCGCTACGGCACTCACGGATTTAATTGTTATTCCTAATGTATCTAt  >  2:64904/1‑47 (MQ=255)                                               | TGCGCTACGGCACTCACGGATTTAATTGTTATTCCTAATGTATCTAT  >  NZ_CP009273/1088066‑1088112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑