Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1165625	1165755	131	2 [0]	[0] 2	ldtC	L,D‑transpeptidase LdtC

CTGCCCGCGCGCGGTACGTAAGGATCAACGCCGGGGTTAGCCTGTAACAGA  >  NZ_CP009273/1165574‑1165624                                                   | cTGCCCGCGCGCGGTACGTAAGGATCAACGCCGGGGTTAGCCTGTAACaga  >  2:322933/1‑51 (MQ=255) cTGCCCGCGCGCGGTACGTAAGGACCAACGCCGGGGTTAGCCTGTAACaga  <  1:322933/51‑1 (MQ=255)                                                   | CTGCCCGCGCGCGGTACGTAAGGATCAACGCCGGGGTTAGCCTGTAACAGA  >  NZ_CP009273/1165574‑1165624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑