Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1379689	1379713	25	5 [1]	[1] 2	ycjX	YcjX family protein

TCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGCA  >  NZ_CP009273/1379599‑1379689                                                                                          |  tCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGc   <  2:308342/90‑1 (MQ=255) tCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGc   <  2:74706/90‑1 (MQ=255)  cACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGCa  <  2:258839/90‑1 (MQ=255)                                        gTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATCTCGTCCGc   >  1:295970/1‑51 (MQ=255)                                        gTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATCTCGTCCGc   <  2:295970/51‑1 (MQ=255)                                                                                          |  TCACTGTTTATCCTGGCGAAGTTCCCGCACGTTTGCCTGGTCAGGCGTTCTGGGATAAGCAAGGCTTCCAGTTTGAGGCATTTCGTCCGCA  >  NZ_CP009273/1379599‑1379689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑