Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2161649	2161661	13	2 [1]	[1] 2	BW25113_RS10880	hypothetical protein

GAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGGTGTAGTATT  >  NZ_CP009273/2161559‑2161654                                                                                          |       gAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGgtgt        <  1:263981/90‑1 (MQ=255)       catcgAAATGAGTTGCATCATTTTTTACTATATTTTCTGCCCCAGATATTCTACCCCTGGCTAAAGAACCTTCGCCTTCGGTGTAGTAtt  <  1:259279/86‑1 (MQ=255)                                                                                          |       GAGTAACACAGAAATGAGTTGCATCATTTTTTACTATATTTTCTGCACCAGATATTCTACCCCTGGCTAAAGAAGCTTCGGCTTCGGTGTAGTATT  >  NZ_CP009273/2161559‑2161654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑