Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3659411	3659431	21	2 [1]	[0] 6	gadX/gadA	acid resistance transcriptional activator GadX/glutamate decarboxylase

ATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATA  >  NZ_CP009273/3659321‑3659421                                                                                          |            ataCAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTtaataa             <  1:316943/90‑1 (MQ=255)            tgtTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCAtata  <  2:6055/90‑1 (MQ=255)                                                                                          |            ATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAGCAAATAATCCCTTTTCGTGACATTAAAGGTAATCGCTACATTTAATAAACATTCATATA  >  NZ_CP009273/3659321‑3659421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑