Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1164354	1164468	115	2 [1]	[0] 3	comR/bhsA	TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA

TTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGCCACTATTATGAAAAACGTAAAAACCCTCATCGCTGCG  >  NZ_CP009273/1164469‑1164558 |                                                                                          ttAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGcc                                      >  1:22116/1‑54 (MQ=255) ttAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGcc                                      <  2:22116/54‑1 (MQ=255) ttAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGCCACTATTATGAAAAACGTAAAAACCCTCATCGCTgcg  >  2:205021/1‑90 (MQ=255) |                                                                                          TTAGTTATCGATCGTTAAGTAATTGCTTGCGACGTCATTCATCTGCATAAGGCCACTATTATGAAAAACGTAAAAACCCTCATCGCTGCG  >  NZ_CP009273/1164469‑1164558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑