Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1211133	1211178	46	4 [0]	[1] 3	bluF/ycgZ	blue light‑responsive regulator BluF/regulatory protein YcgZ

CATTAGCACTAATTGCAAAAAATTAATTTATCATTCTGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTT  >  NZ_CP009273/1211134‑1211228                                              |                                                  cATTAGCACTAATTGCAAAAAATTAATTTATCATTCTGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTaa       >  2:296487/1‑90 (MQ=255)                                              atTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACAttt  <  1:40443/50‑1 (MQ=255)                                              atTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACAttt  >  2:40443/1‑50 (MQ=255)                                              |                                                  CATTAGCACTAATTGCAAAAAATTAATTTATCATTCTGTACACATATTTCGTACAAGTTTGCTATTGTTACTTCACTTAACATTGATTAACATTT  >  NZ_CP009273/1211134‑1211228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑