Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2102908	2102913	6	3 [0]	[1] 6	wzx	O16 family O‑antigen flippase

GCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTG  >  NZ_CP009273/2102909‑2103003      |                                                                                          gCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGAt       >  1:310412/1‑90 (MQ=255)      gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGa                                   <  1:169500/57‑1 (MQ=255)      gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGa                                   >  2:169500/1‑57 (MQ=255)      gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTg  >  2:112804/1‑90 (MQ=255)      gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTg  >  2:1546/1‑90 (MQ=255)      gTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTg  >  2:233973/1‑90 (MQ=255)      |                                                                                          GCATAGTCGCTTGGCAAAAACCGAATATACCGAAATTTTCAGGACCAAGTGTTCTTACAAGATATGGAAATGTAAGCAATGGTAAAAGATAATTG  >  NZ_CP009273/2102909‑2103003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑