Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2243109	2243171	63	3 [1]	[0] 4	yeiE/yeiH	DNA‑binding transcriptional regulator YeiE/YeiH family protein

TATGCCCGGTTAAAGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGT  >  NZ_CP009273/2243172‑2243228 |                                                         tATGCCCGGTTAAAGGAGAGGGTTATGACGAATATCACCTTACAGAaacaa        <  1:63419/51‑1 (MQ=255) tATGCCCGGTTAAAGGAGAGGGTTATGACGAATATCACCTTACAGAaacaa        >  2:63419/1‑51 (MQ=255) tATGCCCGGTTAAAGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGt  <  1:334156/57‑1 (MQ=255) tATGCCCGGTTAAAGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGt  >  2:334156/1‑57 (MQ=255) |                                                         TATGCCCGGTTAAAGGAGAGGGTTATGACGAATATCACCTTACAGAAACAACATCGT  >  NZ_CP009273/2243172‑2243228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑