Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2983821	2983843	23	2 [1]	[1] 2	BW25113_RS14820/BW25113_RS14825	hypothetical protein/hypothetical protein

CTCCATAAGGTGATATTTGACATTATCAGAAGCTGCGAATTCGGATTTTGCTCTAATCAAATGAGAGAAATGTAAAATGAAGCCACGAAATATTAAT  >  NZ_CP009273/2983837‑2983933        |                                                                                          ctcCATAAGGTGATATTTGACATTATCAGAAGCTGCGAATTCGGATTTTGCTCTAATCAAATGAGAGAAATGTAAAATGAAGCCACGaaa         <  1:196303/90‑1 (MQ=255)        aGGTGATATTTGACATTATCAGAAGCTGCGAATTCGGATTTTGCTCTAATCAAATGAGAGAAATGTAAAATGAAGCCACGAAATATtaat  >  2:314277/1‑90 (MQ=255)        |                                                                                          CTCCATAAGGTGATATTTGACATTATCAGAAGCTGCGAATTCGGATTTTGCTCTAATCAAATGAGAGAAATGTAAAATGAAGCCACGAAATATTAAT  >  NZ_CP009273/2983837‑2983933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑