Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3222226	3222246	21	2 [0]	[1] 3	[ygjJ]	[ygjJ]

ACTGTAATTTCATGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAATTATAAAAAC  >  NZ_CP009273/3222236‑3222336            |                                                                                          aCTGTAATTTCATGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACa             >  1:89943/1‑90 (MQ=255)            aTGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAATTATAAAAAc  >  1:239848/1‑90 (MQ=255)            aTGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAATTATAAAAAc  >  1:257657/1‑90 (MQ=255)            |                                                                                          ACTGTAATTTCATGAAAATAAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCGCTAACGCCGACAATTATAAAAAC  >  NZ_CP009273/3222236‑3222336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑