Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	716439	716481	43	2 [0]	[1] 2	BW25113_RS26090/kdpE	leader peptide SpeFL/two‑component system response regulator KdpE

GAGCTTTTTACTCAGTAATATAAAATATTGAATTGTTATTTTTGTGTGT  >  NZ_CP009273/716390‑716438                                                 | gaGCTTTTTACTCAGTAATATAAAATATTGAATTGTTATTTTTgtgtgt  <  1:355166/49‑1 (MQ=255) gaGCTTTTTACTCAGTAATATAAAATATTGAATTGTTATTTTTgtgtgt  >  2:355166/1‑49 (MQ=255)                                                 | GAGCTTTTTACTCAGTAATATAAAATATTGAATTGTTATTTTTGTGTGT  >  NZ_CP009273/716390‑716438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑