Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1386368	1386373	6	5 [1]	[1] 2	pgrR	DNA‑binding transcriptional regulator PgrR

GGCGTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGCGTCG  >  NZ_CP009273/1386277‑1386369                                                                                           |   ggCGTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGC‑GCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGcgt    <  2:99952/90‑1 (MQ=255)  gCGTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGcgt    <  1:520632/90‑1 (MQ=255)    gTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGcgtcg  >  2:195322/1‑90 (MQ=255)            tcgtTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGcgt    >  1:328649/1‑80 (MQ=255)            tcgtTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGcgt    <  2:328649/80‑1 (MQ=255)                                                                                           |   GGCGTTTGTCGTCGTTGCAGAGGAGCGTAGCTTCACTCGTGCAGCAGCCCGCCTGAGCATGGCGCAGTCAGCTTTAAGCCAGATAGTGCGTCG  >  NZ_CP009273/1386277‑1386369

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑