Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3448792	3448818	27	3 [1]	[0] 2	gspA/gspC	type II secretion system protein GspA/type II secretion system protein GspC

CAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAAATAA  >  NZ_CP009273/3448702‑3448803                                                                                          |             cAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTaa              <  2:203777/90‑1 (MQ=255) cAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTaa              <  2:466395/90‑1 (MQ=255)             ttCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAaataa  <  1:115416/90‑1 (MQ=255)                                                                                          |             CAGGTTTGACGTTTCTCACACAACCAGGAAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGATTATCCTTAATCATAAAAATAA  >  NZ_CP009273/3448702‑3448803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑