Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1153954	1154000	47	3 [1]	[1] 4	ptsG	PTS glucose transporter subunit IIBC

GACCTTCTCTCAGTGGGCTGCTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCACCACATCTGGAAC  >  NZ_CP009273/1153864‑1153969                                                                                          |                 gACCTTCTCTCAGTGGGCTGCTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCt                  >  1:166843/1‑90 (MQ=255) gACCTTCTCTCAGTGGGCTGCTTACCAGAACCCGGTAGTTGCGTTCGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCt                  <  1:139359/90‑1 (MQ=255)                 gctgctTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCACCACATCTGGAAc  >  2:22997/1‑90 (MQ=255)                                                                                          |                 GACCTTCTCTCAGTGGGCTGCTTACCAGAACCCGGTAGTTGCGTTTGGCATTTACGGTTTCATCGAACGTTGCCTGGTACCGTTTGGTCTGCACCACATCTGGAAC  >  NZ_CP009273/1153864‑1153969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑