Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2016530	2016540	11	5 [1]	[0] 2	fliR	flagellar biosynthetic protein FliR

GTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGCCC  >  NZ_CP009273/2016440‑2016539                                                                                          |           gTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTc            <  2:59245/90‑1 (MQ=255) gTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTc            <  2:68515/90‑1 (MQ=255)           tGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGccc  <  1:104009/90‑1 (MQ=255)                                                aCCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTc            <  1:174305/43‑1 (MQ=255)                                                aCCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTc            >  2:174305/1‑43 (MQ=255)                                                                                          |           GTGCTGGCGCTGATCTCCACCGCGCCGATTCTGAGCGAACGCAGCGTACCGAAACGGGTAAAACTGGGTCTGGCAATGATGATCACGTTCGCCATTGCCC  >  NZ_CP009273/2016440‑2016539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑