Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2381936	2381944	9	2 [1]	[0] 4	BW25113_RS11875/BW25113_RS11880	hypothetical protein/hypothetical protein

AACCTGGATACCGACAGGTACGTTCTTCCGAAGTTTACGAATTTCACTTAACCATTCCATGTCAAACCCCTTTAAATATTTATGATATTAAATAT  >  NZ_CP009273/2381846‑2381940                                                                                          |      aaCCTGGATACCGACAGGTACGTTCTTCCGAAGTTTACGAATTTCACTTAACCATTCCATGTCAAACCCCTTTAAATATTTATGATATTa       <  1:286495/90‑1 (MQ=255)      ggATACCGACAGGTACGTTCTTCCGAAGTTTACGAATTTCACTTAACCATTCCATGTCAAACCCCTTTAAATATTTATGATATTAAatat  <  1:369017/90‑1 (MQ=255)                                                                                          |      AACCTGGATACCGACAGGTACGTTCTTCCGAAGTTTACGAATTTCACTTAACCATTCCATGTCAAACCCCTTTAAATATTTATGATATTAAATAT  >  NZ_CP009273/2381846‑2381940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑