Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1286073	1286132	60	2 [1]	[1] 2	rssB	two‑component system response regulator RssB

CTGGGATGCAATGGTTGATAACCCTG‑CCGCAGCGGCGAAATTATTACAGGAACTACAACCGCCGGTTCAGCAGGTGATTTCCCATTGCCGGGTTAATTAT  >  NZ_CP009273/1286123‑1286222           |                                                                                           cggggAAGGAATTGTTTAAAACCCCGCCCGCGGGGGCAAAATTTTTACAGAAAAAAAACCCGCCGGTTCAGCAGGTGATTTCCCATTGcc             <  2:56304/88‑1 (MQ=255)           aTGGTTGATAACCCTG‑CCGCAGCGGCGAAATTATTACAGGAACTACAACCGCCGGTTCAGCAGGTGATTTCCCATTGCCGGGTTAATTAt  >  1:186822/1‑90 (MQ=255)           |                                                                                           CTGGGATGCAATGGTTGATAACCCTG‑CCGCAGCGGCGAAATTATTACAGGAACTACAACCGCCGGTTCAGCAGGTGATTTCCCATTGCCGGGTTAATTAT  >  NZ_CP009273/1286123‑1286222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑