Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2988545	2988653	109	2 [1]	[1] 3	BW25113_RS14850/BW25113_RS26010	response regulator transcription factor/hypothetical protein

AATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTT  >  NZ_CP009273/2988649‑2988738      |                                                                                     aaTCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACAtttt  >  1:254979/1‑90 (MQ=255)      ttAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAAc                                         <  1:331345/46‑1 (MQ=255)      ttAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAAc                                         >  2:331345/1‑46 (MQ=255)      |                                                                                     AATCATTAAACTTGAGCCAGGGAGCTATAAGTCCTCAGGGCTTGCCAAAACAGAATTATTCATATCCAAAGAATGTGTTTCAAACATTTT  >  NZ_CP009273/2988649‑2988738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑