Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3179375	3180717–3179454	80–1343	3 [1]	[1] 3	BW25113_RS15805–[BW25113_RS15805]	BW25113_RS15805,[BW25113_RS15805]

TCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTATCATCATTGGTTGTGCGT  >  NZ_CP009273/3180706‑3180807             |                                                                                          tcgcCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTAtcatca              >  2:293745/1‑90 (MQ=255)             tatCTGCGGCAGCTGGCTTGTAATTGGTTAAGTTATAACAGTTGTCTGGAAATCTAGGGGCAAATCCAGTTATCATCATTGGTTGTGCgc  <  2:327956/90‑2 (MQ=18)             tatCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTATCATCATTGGTTGTGCGt  <  2:292507/90‑1 (MQ=255)             |                                                                                          TCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAGTTATCATCATTGGTTGTGCGT  >  NZ_CP009273/3180706‑3180807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑