Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	652899	652917	19	2 [0]	[0] 2	cspE	transcription antiterminator/RNA stability regulator CspE

TGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTC  >  NZ_CP009273/652918‑652952 |                                   tGCCAAAGGCCCTTCTGCTGCAAACGTAATCGctc  <  1:37397/35‑1 (MQ=255) tGCCAAAGGCCCTTCTGCTGCAAACGTAATCGctc  >  2:37397/1‑35 (MQ=255) |                                   TGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTC  >  NZ_CP009273/652918‑652952

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑