Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1269760	1269788	29	2 [1]	[1] 2	ychO	inverse autotransporter invasin YchO

GGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTAT  >  NZ_CP009273/1269670‑1269764                                                                                          |      ggAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCtggtgg       <  1:24558/90‑1 (MQ=255)      cAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTtat  >  2:9406/1‑90 (MQ=255)                                                                                          |      GGAGCCAGCTTGGTCTTACTCAGCAGGATAATGGGTTGGTGAGCAATGTGGGCGTTGGGCAACGCTGGGCGCGCGGCAACTGGCTGGTGGGTTAT  >  NZ_CP009273/1269670‑1269764

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑