Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1459384	1459574	191	2 [1]	[1] 2	BW25113_RS25580	BW25113_RS25580

TGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTG  >  NZ_CP009273/1459294‑1459388                                                                                          |      tgaGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCtttattt       <  1:241997/90‑1 (MQ=255)      aTCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTg  <  1:127468/90‑1 (MQ=255)                                                                                          |      TGAGAATCTGCGACCGAAACAGTAACAGATGTAAAATTATTTTGTCCCTTTAATTATAAAGCAGAGTTATGTTTAAGCTCTGCTTTATTTATTTG  >  NZ_CP009273/1459294‑1459388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑