Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1629638	1629657	20	3 [1]	[1] 2	stfQ	phage tail protein

ATCAAACGACGATGTGGTTTCCGTCCCCAAATCCGTACTGGATGCGCTGGCGCTGTGGGTGTGCGATTTAATGCCGTCCTGTTCCTGAGA  >  NZ_CP009273/1629559‑1629648                                                                               |            aTCAAACGACGATGTGGTTTCCGTCCCCAAATCCGTACTGGATGCGCTGGCGCTGTGGGTGTGCGATTTAATGCCGTCCTGTTCCTgaga  <  1:13114/90‑1 (MQ=255)                                   gTACTGGATGCGCTGGCGCTGTGGGTGTGCGATTTAATGCCGTcc             <  1:212663/45‑1 (MQ=40)                                   gTACTGGATGCGCTGGCGCTGTGGGTGTGCGATTTAATGCCGTcc             >  2:212663/1‑45 (MQ=38)                                                                               |            ATCAAACGACGATGTGGTTTCCGTCCCCAAATCCGTACTGGATGCGCTGGCGCTGTGGGTGTGCGATTTAATGCCGTCCTGTTCCTGAGA  >  NZ_CP009273/1629559‑1629648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑