Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1636362	1636366	5	2 [0]	[1] 2	cspF/BW25113_RS25625	cold shock‑like protein CspF/hypothetical protein

GCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGAGCTATATTAAAGCTTTAATTTCAGGCCCCATCGGATC  >  NZ_CP009273/1636272‑1636361                                                                                          | gCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGAGCTATATTAAAGCTTTAATTTCAGGCCCCATCGGATc  <  1:121261/90‑1 (MQ=255) gCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGAGCTATATTAAAGCTTTAATTTCAGGCCCCATCGGATc  <  2:115523/90‑1 (MQ=255)                                                                                          | GCCGGATAAATGGTCTGCGTGGCCCTTCAGCTGCCAATGTTTACCTTTCATGAGCTATATTAAAGCTTTAATTTCAGGCCCCATCGGATC  >  NZ_CP009273/1636272‑1636361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑