Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2117375	2117387	13	2 [1]	[1] 2	cpsB	mannose‑1‑phosphate guanyltransferase

GAGATCCGGATCGACGGCGCTCATCGCTTTTTCACAGGCATCGAGGATATCCGGGCGATATTTTTTCAGTTCTTCGAGATAGCGTCCGGCGC  >  NZ_CP009273/2117285‑2117376                                                                                          |   gagaTCCGGATCGACGGCGCTCATCGCTTTTTCACAGGCATCGAGGATATCCGGGCGATATTTTTTCAGTTCTTCGAGATAGCGTCCGgc    <  2:218060/90‑1 (MQ=255)   gaTCCGGATCGACGGCGCTCATCGCTTTTTCACAGGCATCGAGGATATCCGGGCGATATTTTTTCAGTTCTTCGAGATAGCGTCCGgcgc  <  1:153128/90‑1 (MQ=255)                                                                                          |   GAGATCCGGATCGACGGCGCTCATCGCTTTTTCACAGGCATCGAGGATATCCGGGCGATATTTTTTCAGTTCTTCGAGATAGCGTCCGGCGC  >  NZ_CP009273/2117285‑2117376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑