Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3108567	3108602	36	4 [1]	[1] 2	sslE	lipoprotein metalloprotease SslE

TGCATGTACAGCGCCAGCACGTTGTTAGCGACTTCAGTTGCACCCGGTACAGTCAACGGCGTTTCTGCGGCGTTATGACCGACTTCATGCCAGATCA  >  NZ_CP009273/3108477‑3108573                                                                                          |        tGCATGTACAGCGCCAGCACGTTGTTAGCGACTTCAGTTGCACCCGGTACAGTCAACGGCGTTTCTGCGGCGTTATGACCGACTTCATGc         <  1:49321/90‑1 (MQ=255)        aCAGCGCCAGCACGTTGTTAGCGACTTCAGTTGCACCCGGTACAGTCAACGGCGTTTCTGCGGCGTTATGACCGACTTCATGCCAGATCa  >  2:302151/1‑90 (MQ=255)           gcgcCAGCACGTTGTTAGCGACTTCAGTTGCACCCGGTACAGTCAACGGCGTTTCTGCGGCGTTATGACCGACTTCATGc         >  1:186450/1‑80 (MQ=255)           gcgcCAGCACGTTGTTAGCGACTTCAGTTGCACCCGGTACAGTCAACGGCGTTTCTGCGGCGTTATGACCGACTTCATGc         <  2:186450/80‑1 (MQ=255)                                                                                          |        TGCATGTACAGCGCCAGCACGTTGTTAGCGACTTCAGTTGCACCCGGTACAGTCAACGGCGTTTCTGCGGCGTTATGACCGACTTCATGCCAGATCA  >  NZ_CP009273/3108477‑3108573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑