Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1706321	1706338	18	2 [1]	[1] 2	nth	endonuclease III

CCTGCATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTTGACATCTGAAGAAAAGGGGTAA  >  NZ_CP009273/1706336‑1706428    |                                                                                          ccTGCATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTTGACATCTGAAGAAAAgggg     <  2:278886/90‑1 (MQ=255)    gCATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTTGACATCTGAAGAAAAGGGGTaa  >  1:253152/1‑90 (MQ=255)    |                                                                                          CCTGCATTGCCCGCAAGCCCCGCTGTGGCTCTTGTATTATTGAAGATCTTTGTGAATACAAAGAGAAAGTTGACATCTGAAGAAAAGGGGTAA  >  NZ_CP009273/1706336‑1706428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑