Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1940891	1940908	18	2 [0]	[1] 5	yebB	YebB family permuted papain‑like enzyme

TGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCC  >  NZ_CP009273/1940898‑1940998            |                                                                                          tGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTg             <  2:213841/90‑1 (MQ=255)            gggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCAGTTTCTGGAAATTCTGGTTCCTGGGTTCTATTcc  >  1:268945/1‑90 (MQ=255)            gggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTAt     >  1:262044/1‑87 (MQ=255)            gggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTAt     <  2:262044/87‑1 (MQ=255)            gggtgAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTcc  >  2:77469/1‑90 (MQ=255)            |                                                                                          TGTATTCCGGTGGGTGAAATAGAGACGTTTGGAGAATTGTTAAATAGCAATCCGAATGCAAAACTCACTTTCTGGAAATTCTGGTTCCTGGGTTCTATTCC  >  NZ_CP009273/1940898‑1940998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑