| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,743,316 | T→G | V167V (GTA→GTC) | ydhT ← | protein YdhT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,743,316 | 0 | T | G | 100.0% | 11.4 / NA | 5 | V167V (GTA→GTC) | ydhT | protein YdhT |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (1/4); total (1/4) | |||||||||||
CGATTTGCACCAGGTCACCATTACTGGCGACATGACACCGTTCACCCAATGTACAAACGCGTACTCGCATTCCGGTATTCGCAATCCGACTGCTATCTCCAGCGCTGCTTATCCGCGAAGAATTACCGGTTACAGCAACCCGTGCG > NZ_CP009273/1743255‑1743400 | cGATTTGCACCAGGTCACCATTACTGGCGACATGACACCGTTCACCCAATGTACAAACGCGGACTCGCATTCCGGTATTCGCAATCCGAc < 1:306381/90‑1 (MQ=255) tGCACCAGGTCACCATTACTGGCGACATGACACCGTTCACCCAATGTACAAACGCGGACTCGCATTCCGGTATTCGCAATCCGACTGCTa < 1:22125/90‑1 (MQ=255) gTTCACCCAATGTACAAACGCGGACTCGCATTCCGGTATTCGCAATCCGACTGCTATCTCCAGCGCTGCTTATCCGCGAAGAATTACCgg > 1:79061/1‑90 (MQ=255) cAATGTACAAACGCGGACTCGCATTCCGGTATTCGCAATCCGACTGCTATCTCCAGCGCTGCTTATCCGCGAAGAATTACCGGTTACAGc < 2:127958/90‑1 (MQ=255) aCGCGGACTCGCATTCCGGTATTCGCAATCCGACTGCTATCTCCAGCGCTGCTTATCCGCGAAGAATTACCGGTTACAGCAACCCGTgcg < 1:91421/90‑1 (MQ=255) | CGATTTGCACCAGGTCACCATTACTGGCGACATGACACCGTTCACCCAATGTACAAACGCGTACTCGCATTCCGGTATTCGCAATCCGACTGCTATCTCCAGCGCTGCTTATCCGCGAAGAATTACCGGTTACAGCAACCCGTGCG > NZ_CP009273/1743255‑1743400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |