Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 1341083 1341244 162 2 [0] [1] 2 [BW25113_RS25050]–[rnb] [BW25113_RS25050],[rnb]

AAATAAAAGGAACAACATGACTTACATGAAATTAACGGCGGCTAAA  >  NZ_CP009273/1341037‑1341082
                                             |
aaataaaAGGAACAACATGACTTACATGAAATTAACGGCGGCTaaa  >  1:42866/1‑46 (MQ=255)
aaataaaAGGAACAACATGACTTACATGAAATTAACGGCGGCTaaa  <  2:42866/46‑1 (MQ=255)
                                             |
AAATAAAAGGAACAACATGACTTACATGAAATTAACGGCGGCTAAA  >  NZ_CP009273/1341037‑1341082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: