Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797613	3797664	52	2 [1]	[1] 3	rfaS	LPS core biosynthesis protein RfaS

CTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAG  >  NZ_CP009273/3797523‑3797634                                                                                          |                       cTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATa                        <  1:298633/90‑1 (MQ=255)                       ttGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAg  <  1:287451/90‑1 (MQ=255)                                                                                          |                       CTCACTGTTTTAACGGTTTTATTTGTCTATAAAATCAGAAACAATCGTTGACATCATTTTATCTGGACTGAATTTATATAAACTATCATAATCCATTGGTTTAACAGATGAG  >  NZ_CP009273/3797523‑3797634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑