Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3797708	3797878	171	3 [1]	[1] 2	rfaS	LPS core biosynthesis protein RfaS

AATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATACATTTATATTATTAGTAATTAATTTTTTATTGA  >  NZ_CP009273/3797660‑3797749                                                |                                           aaTCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATACATTTATATTATTAGTAATTAATTTTTTATTGa  >  2:37457/1‑90 (MQ=255)      tcatGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTg                                            >  1:101302/1‑43 (MQ=255)      tcatGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTg                                            <  2:101302/43‑1 (MQ=255)                                                |                                           AATCATCATGACCTATTATAAAAAAGCGAGATTCACTATAGATTTCTGAACCAAATACATTTATATTATTAGTAATTAATTTTTTATTGA  >  NZ_CP009273/3797660‑3797749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑