Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4272793	4272842	50	2 [0]	[1] 3	espX5	T3SS effector pentapeptide repeat protein EspX5

GTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAA  >  NZ_CP009273/4272749‑4272792                                            | gTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATaaa  <  1:187299/44‑1 (MQ=255) gTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATaaa  >  2:187299/1‑44 (MQ=255)                                            | GTCCGTTTCTTTCGTGATTTTTCCTGATGGTAAACTATCATAAA  >  NZ_CP009273/4272749‑4272792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑