Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	579917	579962	46	2 [1]	[1] 2	appY/ompT	DNA‑binding transcriptional activator AppY/omptin family outer membrane protease OmpT

TCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGTTGTCTACATGTTAATTATAA  >  NZ_CP009273/579827‑579923                                                                                          |        tctcATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGTTGTCTACATGTTa         <  2:177410/90‑1 (MQ=255)        attTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGTTGTCTACATGTTAATTataa  <  2:300698/90‑1 (MQ=255)                                                                                          |        TCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGTTGTCTACATGTTAATTATAA  >  NZ_CP009273/579827‑579923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑