Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1206560	1206611	52	2 [0]	[0] 2	mcrA	5‑methylcytosine‑specific endonuclease McrA

AATATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGACGTAATACCCTACAGGGTAAAAATTTTCTC  >  NZ_CP009273/1206612‑1206692 |                                                                                 aaTATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGACGTAATACCCTACAGGGTAAAAATTTtctc  <  1:348952/81‑1 (MQ=255) aaTATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGACGTAATACCCTACAGGGGAAAAATTTtctc  >  2:348952/1‑81 (MQ=255) |                                                                                 AATATAAACCGATTACAGAAATAAAATTATTTATTAAAGTCACATTTAAGACGTAATACCCTACAGGGTAAAAATTTTCTC  >  NZ_CP009273/1206612‑1206692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑