Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1223435	1223509	75	3 [1]	[1] 2	[BW25113_RS06140]	[BW25113_RS06140]

TTGTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGT  >  NZ_CP009273/1223489‑1223599                      |                                                                                          ttGTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATcc                       >  1:332428/1‑90 (MQ=255)                      tCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTgtgt  <  2:332428/90‑1 (MQ=255)                      |                                                                                          TTGTCGGCGCGGGTTTTCATATCCACGATAAGGTGAGGGGAACGTTATGTATCAACATCACAACTGGCAAGGTGCGCTGCTGGATTATCCGGTGAGTAAAGTAGTCTGTGT  >  NZ_CP009273/1223489‑1223599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑