Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2178147	2178169	23	2 [1]	[0] 2	thiM	hydroxyethylthiazole kinase

GATAATGCACAGCCAGTTCCTACCACTTTGGTCATTAAC  >  NZ_CP009273/2178170‑2178208 |                                       gATAATGCACAGCCAGTTCCTACCACTTTGGTCATTAAc  <  1:80215/39‑1 (MQ=255) gATAATGCACAGCCAGTTCCTACCACTTTGGTCATTAAc  >  2:80215/1‑39 (MQ=255) |                                       GATAATGCACAGCCAGTTCCTACCACTTTGGTCATTAAC  >  NZ_CP009273/2178170‑2178208

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑