Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	579523	579567	45	2 [1]	[0] 2	appY	DNA‑binding transcriptional activator AppY

AATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAAT  >  NZ_CP009273/579568‑579617 |                                                  aatCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAAt  <  1:40407/50‑1 (MQ=255) aatCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAAt  >  2:40407/1‑50 (MQ=255) |                                                  AATCAGTTTTAATATTGAGCGGCAATGGCATTTAAAAGATATTGCGGAAT  >  NZ_CP009273/579568‑579617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑