Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1129678	1129733	56	2 [0]	[0] 2	flgF	flagellar basal‑body rod protein FlgF

GCGTCTTAAACTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGTGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGCCACGCG  >  NZ_CP009273/1129734‑1129823 |                                                                                          gCGTCTTAAACTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGTGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGCCAcgcg  >  2:133801/1‑90 (MQ=255) gCGTCTTAAACTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGCGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGCCAcgcg  >  2:26781/1‑90 (MQ=255) |                                                                                          GCGTCTTAAACTGGTGAAAGCCACGGGCAGCGAAGTGCAGCGCGGTGACGACGGCATTTTTCGTTTAAGCGCAGAAACCCAGGCCACGCG  >  NZ_CP009273/1129734‑1129823

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑