Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1374440	1374448	9	2 [1]	[0] 3	pgmB	beta‑phosphoglucomutase

TGGGTGATTTTATTTTGCCCTTCAATGGGACCGCTACCAAACATCAGGAGGATGAATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATC  >  NZ_CP009273/1374350‑1374446                                                                                          |        tGGGTGATTTTATTTTGCCCTTCAATGGGACCGCTACCAAACATCAGGAGGATGAATGAAACTGCAAGGGGTAATTTTCGATCTGGATgg         <  1:207538/90‑1 (MQ=255)        ttttattttGCCCTTCAATGGGACCGCTACCAAACATCAGGAGGATGAATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATc  <  1:172531/90‑1 (MQ=255)                                                                                          |        TGGGTGATTTTATTTTGCCCTTCAATGGGACCGCTACCAAACATCAGGAGGATGAATGAAACTGCAAGGGGTAATTTTCGATCTGGATGGTGTAATC  >  NZ_CP009273/1374350‑1374446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑