Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1088066	1088092	27	2 [0]	[1] 2	pgaA/dgcT	poly‑beta‑1,6 N‑acetyl‑D‑glucosamine export porin PgaA/GGDEF domain‑containing protein

ATGCATGATTTCGGATTTTTCGAAAGTCCTGATGAAAGGC  >  NZ_CP009273/1088026‑1088065                                        | aTGCATGATTTCGGATTTTTCGAAAGTCCTGATGAAAGGc  >  1:338738/1‑40 (MQ=255) aTGCATGATTTCGGATTTTTCGAAAGTCCTGATGAAAGGc  <  2:338738/40‑1 (MQ=255)                                        | ATGCATGATTTCGGATTTTTCGAAAGTCCTGATGAAAGGC  >  NZ_CP009273/1088026‑1088065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑