Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1114149	1114157	9	5 [1]	[0] 2	yceJ	cytochrome b

AGCCAAAAATGCAGGGCACCGGCAAAGTCTGCCTGTGCGCCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGATC  >  NZ_CP009273/1114060‑1114149                                                                                         |  aGCCAAAAATGCAGGGCACCGGCAAAGTCTGCCTGTGCGCCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGATc  <  2:37914/90‑1 (MQ=255)                                     gcgcCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGAt   <  1:267381/53‑1 (MQ=255)                                     gcgcCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGAt   >  2:267381/1‑53 (MQ=255)                                       gcCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGAt   <  1:133630/51‑1 (MQ=255)                                       gcCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGAt   >  2:133630/1‑51 (MQ=255)                                                                                         |  AGCCAAAAATGCAGGGCACCGGCAAAGTCTGCCTGTGCGCCAGCGTCGGCAAGGGTCGCGGGGACGTCAAACCAGCCAAAAACGCTGATC  >  NZ_CP009273/1114060‑1114149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑